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What is the best way to limit the number of running jobs in genomestrip?

bnelsjbnelsj University of WashingtonMember

Previously, I had used -qsub -parallelJobs 5 to limit the number of simultaneously running jobs, but I have been told using the -qsub flag is not preferable:

@bhandsaker said:
Also, you probably do not want to pass "-qsub" as this can override other settings. Just setting -jobRunner / -gatkJobRunner to Drmaa is the preferred thing to do.

What is the best way to set such a limit?


Best Answer


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