Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
How to determine sex from Bam Filles
There is some easy way to detect the sex of the sequenced genome? I saw this entrance
but i am not sure if it is the same case (i am new at GATK), there is some "Hans on" manual or guide that i could use to start?