Test-drive the GATK tools and Best Practices pipelines on Terra


Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

Can I run GATK with java version 8?

Hello, I want to perform variant calling using GATK tools. I have downloaded GATK in my computer but I cannot open the file "GenomeAnalysisTK.jar". I have installed java version 8. Could this be the reason? Is GATK compatible with this version of java? If not, could you please give me a solution to be able to run GATK?

Thanks in advance,

Olivia

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