Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
when i do baserecalibrator with my sample
i got an error "SAM/BAM/CRAM file [email protected]3dc4266 appears to be using the wrong encoding for quality scores: we encountered an extremely high quality score (93) with BAQ correction factor of 4; please see the GATK --help documentation for options related to this error"
I tried all of the following options one by one,but it do not work.