To celebrate the release of GATK 4.0, we are giving away free credits for running the GATK4 Best Practices pipelines in FireCloud, our secure online analysis portal. It’s first come first serve, so sign up now to claim your free credits worth $250. Sponsored by Google Cloud. Learn more at

Bug in CombineVariants

This used to work, but it's broken in the latest release at least. CombineVariants with the --assumeIdenticalSamples option complains if there are multiple vcfs with duplicate sample names.



Sign In or Register to comment.