Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

UnifiedGenotyper for specific regions

We sequenced the exoms of about 50 genes.
UnifiedGenotyper seems to call variants along the whole genome.
How can I restrict the region of variant calling?

Best Answer


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