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GATK Module File

bgovreaubgovreau St. LouisMember


I'm currently working on creating a module file on my cluster for GATK. I set the prepend path to the directory in which I saved my .jar file, but when I attempt to use said file (command: java -jar GenomeAnalysisTK.jar -h), java cannot find it. It does, however, work when I am in the directory in which it is saved, but not when I add it as a module file. Any ideas?



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