Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

What is the option to run the HaplotypeCaller in multi core

fborjafborja PhilippinesMember

I tried using -nct as documented here but when I run it with the -nct option I have this error: The analysis HaplotypeCaller currently does not support parallel execution with nct. Please run your analysis without the nct option.

Thank you in advance.

Best Answer


Sign In or Register to comment.