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GenotypeGVCFs remaining runtime estimate incorrect
I have noticed when using the GenotypeGVCFs walker (version 3.2), that the remaining runtime estimate is very poor. The estimate from CombineGVCFs and other walkers on the other hand is very accurate. This is not a critical bug. It is rather a feature enhancement. I just noticed that the "completed" percentage is also incorrect. It does not start at 0%. In fact it has stayed constant after walking over 2 million base pairs of 2000 samples in 2 hours. I am not using multi threading. Not that important to me, but I thought I would let you know.