Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Cannot downsample using printReads an -dcov parameter. No effect over original bam observed.
Cannot downsample using printReads an -dcov parameter (and -dt ALL_READS or BY_SAMPLE). No effect over original bam observed. Only -dfrac seems work. I'm using GATK 3.1-1-g07a4bf8. I read it is posible. What could be the problem?
Thanks a lot.