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Possible Bug (Unable to retrieve result)

terroan92terroan92 United StatesMember

After running 'java -Xmx4g -jar GenomeAnalysisTK.jar -T VariantRecalibrator -input MEN0024-Tumor.vcf -R human_g1k_v37.fasta -tranchesFile output.tranches -nt 16 -recalFile output.recal -resource:hapmap,known=false,training=true,truth=true,prior=15.0 hapmap_3.3.b37.vcf -resource:omni,known=false,training=true,truth=false,prior=10.0 1000G_omni2.5.b37.vcf -resource:dpsnp,known=true,training=false,truth=false,prior=2.0 dbsnp_138.b37.vcf -an QD -an MQRankSum -an ReadPosRankSum -an FS -an DP -mode SNP >> test' from the command line I get an error message about being unable to retrieve results. Am I missing some necessary arguments?


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