This site is now read-only. You can find our new documentation site and support forum for posting questions here.
Be sure to read our welcome blog!
How are splice sites annotated?
In Oncotator, the variant classification of SPLICE_SITE occurs when a variant is within two bases of a splice site on either the exon or intron side.
To determine whether a specific SPLICE_SITE is exon or intron, and to get the exact variant classification, use the