Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

Manual variant filtration

nyoung16nyoung16 United KingdomMember

Are there any recommendations about what percentage of SNPs should be filtered out from the data set when tweaking the filter criteria?

Many thanks


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