If you happen to see a question you know the answer to, please do chime in and help your fellow community members. We appreciate your help!

Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

What genome builds does Oncotator support?

Geraldine_VdAuweraGeraldine_VdAuwera Cambridge, MAMember, Administrator, Broadie admin

Oncotator is technically capable of processing any genome build you want, including genomes of non-human organisms. However, we currently only provide explicit user support for the hg19 build of the human genome for practical reasons. In time we will expand this to other genome builds.



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