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Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Unified Genotyper capacity
How many samples and of what file/genome size can the Unified Genotyper process simultaneously ?
I will have about 250 samples, genome size 180Mb, bam sizes 3-5GB, reduced bam sizes ~1GB.
Also, how long would this take can it be multi-threaded ?