Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

call tri-allelic SNPs in one sample


I would like to know if GATK can call tri-allelic variants in one single sample? I am asking this because I am interested in clonal mosaicism and then looking at tri-allelic variants might be a way to look into that...

Thanks in advance,
João Fadista


Best Answer


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