Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.


rnaharrnahar SingaporeMember

What does --minimum_normal_allele_fraction parameter mean ? could anyone elaborate.
I tried using it as I suspect tumor contamination in my normal - however it just prints the allele freq I mention in the vcf file in the column for normal sample.

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