Currently the "Log in with Google" button redirects you to a "Page not found." This is an issue that our forum vendors are working on fixing. In the meantime, while on the "Page not found" you can edit the URL to delete the second gatk, firecloud, or wdl (depending on what subforum you are acessing).
percentBad parameter in VariantRecalibrator
I do apologise in case this question has been answered already but I couldn't find an updated thread on it.
In my previous code I had a conditional based on the number of samples to modify the
percentBad parameter in VariantRecalibrator.
Now I get an error from my scala code as if the value were not anymore a member of the class.
Checking again in the Best Practices and in the VariantRecalibrator documentation I can't find it anymore.
Could you confirm it's not used anymore? or am I doing something wrong?