Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Please add an explicit type tag :NAME
I am using the VariantsToTable walker to convert my vcfs to tabular format. However, I keep getting the following error:
Invalid command line: No tribble type was provided on the command line and the type of the file could not be determined dynamically. Please add an explicit type tag :NAME listing the correct type from among the supported types
The problem is that I don't understand what is meant by the advice. How do you actually provide the :NAME tag in the command line - I have tried a number of ways and nothing seems to work and I can't find any reference to this tag in the documentation.