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GATK version 4.beta.3 (i.e. the third beta release) is out. See the GATK4 beta page for download and details.

Relationship between number of samples and genotyping calling accuracy

For the UnifiedGenotyper, I was wondering if you knew of any data describing the relationship between the number of samples which are simultaneously analysed, and the accuracy of the genotype calling, say for a SNP with a MAF of 0.1, and a coverage of 30X. Presumably this plateaus after a certain number of samples.

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