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gCNV "case-mode" or Somatic CNV?

mikyatopemikyatope BarcelonaMember

Hi all,

I've a question regarding gCNV "case-mode", is it still considered beta functionality?

The bulk of my CNV analysis are single germline cases vs a panel of controls. If gCNV case mode is still in beta, should I better use Somatic CNV calling using my controls like a panel of normals?

thanks!

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