If you happen to see a question you know the answer to, please do chime in and help your fellow community members. We appreciate your help!

Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

I am attempting to run CASE mode on GermlineCNVCaller but get an error stating a denoised model must

I am attempting to run CASE mode on but keep getting the error "An input denoising-model directory must be provided in the CASE mode"
I can run the Denoising tool on my prior table but this doesn't give a directory only files. Also I find no documentation for an input to provide 'de-noised model' for GermlineCNVCaller


Sign In or Register to comment.