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Where is the folder cohort23-twelve in GATK germilineCNV calling pipeline ?

Hi

I am following this for calling germline variants. In the section GermlineCNVCaller in COHORT MODE , output folder is --output cohort24-twelve, however, in the section GermlineCNVCaller in CASE MODE , the model folder name is different --model cohort23-twelve/cohort23-twelve_1of2-model.

I am wondering where this folder (cohort23-twelve) came from ?

Answers

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