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PrintReads out of space on device
I'm running PrintReads and gettting the "There is no space left on the device, so writing failed" error message, but we have 1.7TB free disk space. Is PrintReads using temporary space and if so how much does it needed? I couldn't find any documentation on it.
Could the error message be altered to give information on which device ran out of space?
Program Args: -T PrintReads -R ../../ref/taeGut1.bamorder.fasta -I ../indel_realigner_B/173.realigned.bam -BQSR 173.recal.grp -o 173.recal.bam