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I would like to know if there is a way to include SAC (StrandAlleleCountsBySample) annotation in my vcf files?
I know such annotation is only available in HC. But I want to know if there is a way to run HC again only to include such SAC annotation.
I'm asking this because HC took too much time and memory to run on my 91 samples.
Sorry if this question is repetitive or too basic, but I couldn't find the answer in another question on forum or in tutorials.
Thank you so much