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GenomicDBImport too slow!!!!!

AlexandraAlexandra ItalyMember
Dear all,
I'm runnig GenomicDBImport for 30 samples. It takes soo much time and after 3 days job killed for walltime exceeded limit. I want to ask you If there is a way to let it become faster.
I thought to do a cycle of different jobs for each chromosome ... is it possibile? that case, dbimport should create different folder for each chromosome? And and that point GenotypeGVCF is able to open all the different chromosomes folder or should I merge them?


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