We've moved!
This site is now read-only. You can find our new documentation site and support forum for posting questions here.
Be sure to read our welcome blog!

Missing metrics for a sample with CollectVariantCallingMetrics

udpudp virginiaMember

I am using CollectVariantCallingMetrics on vcf generated with GATK, version and my Picard version is 2.1.0. Interestingly while my vcf has 4 samples, I got the metrics for only 3 samples. Am I missing something here? I did not error out while running the tool.


Sign In or Register to comment.