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Missing metrics for a sample with CollectVariantCallingMetrics

udpudp virginiaMember

I am using CollectVariantCallingMetrics on vcf generated with GATK, version and my Picard version is 2.1.0. Interestingly while my vcf has 4 samples, I got the metrics for only 3 samples. Am I missing something here? I did not error out while running the tool.


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