Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Combine gvcf files generated with GATK and Isaac
Hi. I have a batch of g.vcf files generated with IsaacVariantCaller. I also have another batch generated with GATK HaplotypeCaller. I want to combine these to batches to perform GenotypeGVCFs. Is there any way to combine these two batches? I do not have BAM files of the samples generated with Isaac, so I can't start from that step. Thank you in advance.