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Allele Balance for ABHets & ABHom
Is there a threshold value for the annotation ‘Allele Balance’ to call the SNP as heterozygous or homozygous call? I have calls where ABHet=0.073 and ABHom=0.100; it would have been more appropriate to call the former an alternate homozygous call and the latter as homozygous with the reference and not called at all by UG.