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Where do I get missing walkers?
I've downloaded both the full and the Lite version of GATK 2.0. In both cases the available java files in the folder "resources" are the following:
CountLoci; DepthOfCoverage; Pileup; ValidatingPileup; CountReads; PrintReads
Do these correspond to the actually available walkers in my installation?
If so, is there a way to get the other GATK walkers? I have non-commercial purposes and was planning to test some pipelines, so actually any version would do.