Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.


Geraldine_VdAuweraGeraldine_VdAuwera Cambridge, MAMember, Administrator, Broadie admin
edited September 2012 in GenomeSTRiP Documentation

1. Introduction

The ComputeInsertStatistics utility prints statistics about the data in a
binary histogram file.

The printed metrics include the median insert size and robust standard
deviation (RSD). The RSD is the width of the central 68% of the insert size

2. Inputs / Arguments

  • -I <histogram-file> : The input binary histogram file.

3. Outputs

  • -O <output-file> : Tab-delimited output file (default is stdout).
Post edited by Geraldine_VdAuwera on
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