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Examples of exome fastq and vcfs using GATK4 HaplotypeCaller + bwa mem 0.7.17?

nbaylonnbaylon Member
edited October 2018 in Ask the GATK team

Hi all,

I'm working on a GATK 4.0 fastq to vcf pipeline, and I'm wondering for validation purposes if anyone knows where I could find, or could share with me, exome fastq files and their corresponding vcfs after running HaplotypeCaller (GATK4) and bwa-mem (0.7.17)? Thanks so much.


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