This site is now read-only. You can find our new documentation site and support forum for posting questions here.
Be sure to read our welcome blog!
Non model organisms SNP database
When creating a custom training database of "known sites" we do stringent filtering to create a .vcf of variants to use. If we have one control sample and several phenotype samples- does the created database come from their respective sample or do we create the database from the control sample and use that database as the training database of "known sites" for all the samples? Are these custom training databases used in Mutect2?