Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Collected FAQs about VCF files
1. What file formats do you support for variant callsets?
We support the Variant Call Format (VCF) for variant callsets. No other file formats are supported.
2. How can I know if my VCF file is valid?
3. Are you planning to include any converters from different formats or allow different input formats than VCF?
No, we like VCF and we think it's important to have a good standard format. Multiplying formats just makes life hard for everyone, both developers and analysts.