Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
I have two whole exome sequence data files. I have aligned them and and sorted them using BWA and picard. I want to create a single VCF file using these two samples.
As i am a newbie to computational science is there a GATK step wise tutorial that could take me through this process?