Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
how to select snp read in both direccions
I am trying to extract from vcf SNP found in both read directions (forward and reverse). I would like to mention that this kind of information is different from GT informationt
is it possible using gatk, or exist any flag at the vcf file giving this information?