Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
CalculateTargetCoverage for WGS
Hi, is it appropriate to use CalculateTargetCoverage for WGS? I'm confused by how the description "Calculates read-counts across targets for the exome copy number variant (CNV) calling workflow" would apply when WGS doesn't involve target capture regions. Thanks for the advice.