If you happen to see a question you know the answer to, please do chime in and help your fellow community members. We encourage our fourm members to be more involved, jump in and help out your fellow researchers with their questions. GATK forum is a community forum and helping each other with using GATK tools and research is the cornerstone of our success as a genomics research community.We appreciate your help!
Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
How can I access the GSA public FTP server?
NOTE: This article will be deprecated in the near future as this information will be consolidated elsewhere.
We make various files available for public download from the GSA FTP server, such as the GATK resource bundle and presentation slides. We also maintain a public upload feature for processing bug reports from users.
There are two logins to choose from depending on whether you want to upload or download something:
location: ftp.broadinstitute.org username: gsapubftp-anonymous password: <blank>
location: ftp.broadinstitute.org username: gsapubftp password: 5WvQWSfi
Using a browser as FTP client
If you use your browser as FTP client, make sure to include the login information in the address, otherwise you will access the general Broad Institute FTP instead of our team FTP. This should work as a direct link (for downloading only):