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Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
We will be out of the office on November 11th and 13th 2019, due to the U.S. holiday(Veteran's day) and due to a team event(Nov 13th). We will return to monitoring the GATK forum on November 12th and 14th respectively. Thank you for your patience.
How avoid the warning "WARN 11:38:44,636 Mimetypes - Unable to find 'mime.types' file in classpath"
I have this warning : WARN 11:38:44,636 Mimetypes - Unable to find 'mime.types' file in classpath , to configure properly, what I have to do?
I just run the first walker (works fine, and it is quick in execution), but then, it spend so much time in "GATKRunReport" phase. (could be caused by this warning ?..).