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ReadBackedPhasing missed calls

hello,
I found a few calls which were missed or wrongly called by ReadBackedPhasing tool.
I used the latest version of GATK3 (GenomeAnalysisTK-3.8-1-0-gf15c1c3ef).
Are there any ways to fix them?

chr7 140453136 . AC TT . PASS AC=1;AF=0.500;AN=2 GT:HP:PQ 0/1:140453136-1,140453136-2:16034.57
chr11 108150313 . CTCA TTCG . PASS AC=1;AF=0.500;AN=2 GT:HP:PQ 0/1:108150313-1,108150313-2:6123.96

Answers

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