Does ReadBackedPhasing use paired end information

ealleneallen Member
edited July 2012 in Ask the GATK team

Hi,

I've found some paired end reads in which read1 captures one het site, and read2 captures another het site, with no hets in between, but the two hets are not in phase according to ReadBackedPhasing. Does RBP take advantage of paired reads ?

Thanks

Answers

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