How can you do a loss/gain of function analyis

tamoghnamandaltamoghnamandal Member
edited May 2018 in Ask the GATK team

I after performing 2 whole exome sequencing, I presently have lists of GATK variants after the initial analysis. I have done a snp_eff analysis using galaxy. But I want to also figure out which of these genes can have a loss or gain of function due to the mutation present.


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