Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
On running CombineGVCF from gatk-126.96.36.199, nothing happens..even the help file does not come..java hangs..has anyone experienced this issue? This is the command I used:
java -jar gatk-188.8.131.52/gatk-package-184.108.40.206-local.jar CombineGVCFs
Java version 1.8.0