Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
FilterMutectCalls change between 184.108.40.206 and 220.127.116.11
I tried running
FilterMutectCalls on a VCF generated with
Mutect2 for matched tumor-normal samples. With 18.104.22.168, I get some variants that are labeled
PASS as would be expected, but with 22.214.171.124, I get 0. I could not find any documentation that explains such a big change in behavior. Is this a bug? Or did I have variants erroneously labeled as PASS before?