Test-drive the GATK tools and Best Practices pipelines on Terra

Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.

Put the reference files on hdfs or in local directory when using spark tools (e.g. BwaSpark)

Hi, does anyone know whether we should put the reference files on hdfs or in some local directory on each datanode?
I did not find any examples about this. Could anyone help?

Thank you!


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