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ReadBackedPhasing of somatic and germline variants?
I'd like to know which germline variants are proximal to and on the same chromosome as detected somatic variants. Is there an out-of-the-box way to phase germline and somatic variants to one another? If not, do you see a role for GATK ReadBackedPhasing?
Thanks for your help and my apologies if this has been answered already, I couldn't find anything related.