Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Which version of Spark works well with the current GATK 4.0?
I am interested in using GATK4.0 with Spark on my PC. From previous posts I noticed that there is compatibility issue (errors) of GATK4 with the latest version of Spark (2.1 or 2.2 if I am correct). Which version of Spark should I use to run GATK4.0 ?
Furthermore, will the calling results be different between the GATK-spark and GATK-withoutspark versions?
Thank you so much !