Our staff will be observing the holiday and will be unavailable from 22nd to 25th November. This will cause a delay in reaching out to you and answering your questions immediately. Rest assured we will get back to it on Monday November 26th. We are grateful for your support and patience.
Have a great holiday everyone!!!
Could I run ASEReadCounter on homozygous SNPs?
The documentation of ASEReadCounter states that this tool is designed for heterozygous SNPs. However, could I still use it to calculate ref and alt allele read depth on hom-SNPs? My purpose is to check consistency between RNA-Seq and DNA-Seq samples from the same individuals, in order to identify potential contamination in RNA samples.