Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
I copy and paste the code about CreateSequenceGroupingTSV and in this way I created a python file...
When I'm going to run it I have the following error:
:~/GATK4/IlluminaExomePairEnd/0.pipe$ python 8.CreateSequenceGroupingTSV.py
File "8.CreateSequenceGroupingTSV.py", line 31
hg38_protection_tag = ":1+"
IndentationError: unindent does not match any outer indentation level
Any help to fix it!?