If you happen to see a question you know the answer to, please do chime in and help your fellow community members. We appreciate your help!
Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
Version highlights for GATK version 4.0
The brand new 4.0 version of the GATK was released -- at long last! -- on Tuesday Jan 9, 2018.
In lieu of our traditional version highlights, for this release we have collected the following resources:
- GATK4 launch page on the GATK website: Summarizes key features and links to resources
- Broad Institute press release and GenomeWeb story on GATK4: Key features and importance for the field/industry
- Intel blog post on GATK4: Discusses the optimization work of the Intel-Broad Center for Genomic Data Engineering around GATK4
- The video of our live launch event, which will also be uploaded to YouTube in the next few days
Coming soon: The GATK4 migration guide will detail the key differences at the level of tools and command lines that you should watch out for when you upgrade to using GATK4 in your own work.